moosez

• moosez package
  • Submodules
  • moosez.constants module
    • USAGE_MESSAGE
  • moosez.display module
  • moosez.download module
    • download_enhance_data()
    • get_default_download_folder()
  • moosez.file_utilities module
    • copy_file()
    • copy_files_to_destination()
    • create_directory()
    • find_pet_file()
    • get_files()
    • get_nifti_file_stem()
    • moose_folder_structure()
    • select_files_by_modality()
  • moosez.image_conversion module
    • create_dicom_lookup()
    • dcm2niix()
    • is_dicom_file()
    • non_nifti_to_nifti()
    • remove_accents()
    • rename_nifti_files()
    • standardize_to_nifti()
  • moosez.image_processing module
    • ImageChunker
      • ImageChunker.array_to_chunks()
      • ImageChunker.chunks_to_array()
      • ImageChunker.determine_splits()
    • ImageResampler
      • ImageResampler.chunk_along_axis()
      • ImageResampler.resample_chunk_SimpleITK()
      • ImageResampler.resample_image_SimpleITK_DASK()
      • ImageResampler.resample_image_SimpleITK_DASK_array()
      • ImageResampler.resample_segmentation()
      • ImageResampler.reslice_identity()
    • confirm_orientation()
    • confirm_orthonormality()
    • convert_to_sitk()
    • determine_orientation_code()
    • expand_segmentation_fov()
    • get_intensity_statistics()
    • get_shape_statistics()
    • largest_connected_component()
    • limit_fov()
    • standardize_image()
  • moosez.input_validation module
    • determine_model_expectations()
    • select_moose_compliant_subjects()
  • moosez.moosez module
    • main()
    • moose()
    • moose_subject()
  • moosez.predict module
    • cropped_fov_prediction_pipeline()
    • initialize_predictor()
    • predict_from_array_by_iterator()
    • preprocessing_iterator_from_array()
  • moosez.resources module
  • Module contents
    • moose()